get_scispacy_entities

get_scispacy_entities(prefix, **kwargs)

Iterate over entities in a given ontology via pyobo.

Parameters:

• prefix (str) – The ontology’s prefix, such as go` for Gene Ontology, ``doid for the Disease Ontology, or more.

• kwargs (Unpack[GetOntologyKwargs]) – keyword arguments to pass to pyobo.get_ontology(), such as version.

Yields:

Entity objects for all terms in the ontology

Return type:

Iterable[Entity]